Camila Caldana

Pós-doutorado

Formação complementar

Idiomas

Áreas de atuação

Organização de eventos

Participação em eventos

Participação em bancas

Comissão julgadora das bancas

Orientou

Foi orientado por

Produções bibliográficas

• WINCK, FLAVIA V. ; MELO, DAVID O. PÁEZ ; RIAÑO-PACHÓN, DIEGO M. ; MARTINS, MARINA C. M. ; Caldana, Camila ; BARRIOS, ANDRÉS F. GONZÁLEZ . Analysis of Sensitive CO2 Pathways and Genes Related to Carbon Uptake and Accumulation in Chlamydomonas reinhardtii through Genomic Scale Modeling and Experimental Validation. Frontiers in Plant Science , v. 7, p. fpls.2016.00043, 2016.

• KÖLLN, ORIEL TIAGO ; FRANCO, HENRIQUE COUTINHO JUNQUEIRA ; FERREIRA, DANILO ALVES ; VARGAS, VITOR PAULO ; CASTRO, SAULO AUGUSTO DE QUASSI ; CANTARELLA, HEITOR ; Caldana, Camila ; TRIVELIN, PAULO CESAR OCHEUZE . Root extracts of Bracchiaria humidicola andSaccharum spontaneum to increase N use by sugarcane. Scientia Agricola , v. 73, p. 34-42, 2016.

• DOBRENEL, THOMAS ; Caldana, Camila ; HANSON, JOHANNES ; ROBAGLIA, CHRISTOPHE ; VINCENTZ, MICHEL ; VEIT, BRUCE ; MEYER, CHRISTIAN . TOR Signaling and Nutrient Sensing. Annual Review of Plant Biology (Print) , v. 67, p. 261-285, 2016.

• DE CASTRO, PATRÍCIA ALVES ; DOS REIS, THAILA FERNANDA ; DOLAN, STEPHEN K. ; MANFIOLLI, ADRIANA OLIVEIRA ; BROWN, NEIL ANDREW ; JONES, GARY W. ; DOYLE, SEAN ; RIAÑO-PACHÓN, DIEGO M. ; SQUINA, FÁBIO MÁRCIO ; Caldana, Camila ; SINGH, ASHUTOSH ; DEL POETA, MAURIZIO ; HAGIWARA, DAISUKE ; SILVA-ROCHA, RAFAEL ; GOLDMAN, GUSTAVO H. . The Aspergillus fumigatus SchA SCH9 kinase modulates SakA HOG1 MAP kinase activity and it is essential for virulence. Molecular Microbiology (Print) , v. 102, p. 642, 2016.

• JORGE, TIAGO F. ; RODRIGUES, JOÃO A. ; Caldana, Camila ; SCHMIDT, ROMY ; VAN DONGEN, JOOST T. ; THOMAS-OATES, JANE ; ANTÓNIO, CARLA . Mass spectrometry-based plant metabolomics: Metabolite responses to abiotic stress. Mass Spectrometry Reviews (Print) , v. 35, p. 620-649, 2016.

• BROWN, NEIL ANDREW ; DOS REIS, THAILA FERNANDA ; REIS, LAURE ; Caldana, Camila ; MAH, JAE-HYUNG ; YU, JAE-HYUK ; MACDONALD, JEFFREY M. ; GOLDMAN, GUSTAVO HENRIQUE . G-protein coupled receptor mediated nutrientsensing and developmental control in Aspergillus nidulans . Molecular Microbiology (Print) , v. 98, p. 420-439, 2015.

• FALA, ANGELA M. ; OLIVEIRA, JULIANA F. ; ADAMOSKI, DOUGLAS ; ARICETTI, JULIANA A. ; DIAS, MARILIA M. ; DIAS, MARCIO V. B. ; SFORÇA, MAURÍCIO L. ; LOPES-DE-OLIVEIRA, PAULO S. ; ROCCO, SILVANA A. ; Caldana, Camila ; DIAS, SANDRA M. G. ; AMBROSIO, ANDRE L. B. . Unsaturated fatty acids as high-affinity ligands of the C-terminal Per-ARNT-Sim domain from the Hypoxia-inducible factor 3α. Scientific Reports , v. 5, p. 12698, 2015.

• SCHMIDT, ROMY ; Caldana, Camila ; Mueller-Roeber, Bernd ; SCHIPPERS, JOS HM . The contribution of SERF1 to root-to-shoot signaling during salinity stress in rice. Plant Signalling & Behavior (Online) , v. 9, p. e27540, 2014.

• ABDELNUR, PATRICIA V ; Caldana, Camila ; MARTINS, MARINA C M . Metabolomics applied in bioenergy. Chemical and Biological Technologies in Agriculture , v. 1, p. 22, 2014.

• CALDANA, C ; LI, Y. ; Leisse, Andrea ; ZHANG, Y. ; BARTOLOMEU, L. ; Fernie, A. R. ; Willmitzer, L. ; Giavalisco, P. . Systemic analysis of inducible target of rapamycin mutants reveal a general metabolic switch controlling growth in. Plant Journal (Print) , v. 73, p. 897-909, 2013.

• DE SOUZA, WAGNER R. ; MORAIS, ENYARA REZENDE ; KROHN, NADIA GRACIELE ; SAVOLDI, MARCELA ; GOLDMAN, MARIA HELENA S. ; RODRIGUES, FERNANDO ; Caldana, Camila ; SEMELKA, CHARLES T. ; TIKUNOV, ANDREY P. ; MACDONALD, JEFFREY M. ; GOLDMAN, GUSTAVO HENRIQUE . Identification of Metabolic Pathways Influenced by the G-Protein Coupled Receptors GprB and GprD in Aspergillus nidulans. Plos One , v. 1, p. e62088, 2013.

• TOPFER, N. ; CALDANA, C. ; GRIMBS, S. ; Willmitzer, L. ; Fernie, A. R. ; NIKOLOSKI, Z. . Integration of Genome-Scale Modeling and Transcript Profiling Reveals Metabolic Pathways Underlying Light and Temperature Acclimation in Arabidopsis. The Plant Cell , v. 25, p. 1197-1211, 2013.

• PEREZ-PEREZ, J. M. ; ESTEVE-BRUNA, D. ; GONZALEZ-BAYON, R. ; KANGASJARVI, S. ; CALDANA, C. ; Hannah, M. A. ; Willmitzer, L. ; Ponce, M. R. ; Micol, J. L. . Functional redundancy and divergence within the Arabidopsis RETICULATA-RELATED gene family. Plant Physiology (Bethesda) , v. 162, p. 589-603, 2013.

• Hubberten, Hans-Michael ; Klie, Sebastian ; CALDANA, C ; Degenkolbe, Thomas ; Willmitzer, Lothar ; Hoefgen, Rainer . An additional role of O-acetylserine as a sulphur status independent regulator during plant growth. Plant Journal (Print) , v. 70, p. 666-677, 2012.

• CALDANA, C ; Morales, Soledad García ; Trejo-Téllez, Libia Iris ; Gómez Merino, Fernando Carlos ; Espinosa-Victoria, David ; Herrera Cabrera, Braulio Edgar . Growth, photosynthetic activity, and potassium and sodium concentration in rice plants under salt stress. Acta Scientiarum. Agronomy (Online) , v. 34, p. 317-324, 2012.

• Klie, Sebastian ; CALDANA, C ; NIKOLOSKI, Z. . Compromise of multiple time-resolved transcriptomics experiments identifies tightly regulated functions. Frontiers in Plant Science , v. 3, p. 1-12, 2012.

• CALDANA, C ; Fernie, A.R. ; Willmitzer, L. ; Steinhauser, D. . Unraveling retrograde signaling pathways: finding candidate signaling molecules via metabolomics and systems biology driven approaches. Frontiers in Plant Science , v. 3, p. 267, 2012.

• BALAZADEH, S. ; Kwasniewski, M. ; CALDANA, C ; MEHRNIA, M. ; Zanor, M. I. ; Xue, G.-P. ; Mueller-Roeber, B. . ORS1, an H2O2-Responsive NAC Transcription Factor, Controls Senescence in Arabidopsis thaliana. MOL PLANT , v. 4, p. 346-360, 2011.

• CALDANA, C ; Degenkolbe, Thomas ; Cuadros-Inostroza, Alvaro ; Klie, Sebastian ; Sulpice, Ronan ; Leisse, Andrea ; Steinhauser, Dirk ; Fernie, Alisdair R. ; Willmitzer, Lothar ; Hannah, Matthew A . High-density kinetic analysis of the metabolomic and transcriptomic response of Arabidopsis to eight environmental conditions. Plant Journal (Print) , v. 67, p. 869-884, 2011.

• Rohrmann, Johannes ; Tohge, Takayuki ; Alba, Rob ; Osorio, Sonia ; CALDANA, C ; McQuinn, Ryan ; Arvidsson, Samuel ; van der Merwe, Margaretha J. ; Riaño-Pachón, Diego Mauricio ; Mueller-Roeber, Bernd ; Fei, Zhangjun ; Nesi, Adriano Nunes ; Giovannoni, James J. ; Fernie, Alisdair R. . Combined transcription factor profiling, microarray analysis and metabolite profiling reveals the transcriptional control of metabolic shifts occurring during tomato fruit development. Plant Journal (Print) , v. 68, p. 999-1013, 2011.

• Hannah, M. A. ; CALDANA, C ; Steinhauser, D. ; Balbo, I. ; Fernie, A. R. ; Willmitzer, L. . Combined transcript and metabolite profiling of Arabidopsis thaliana grown under widely variant growth conditions facilitates the identification of novel metabolite mediated regulation of gene expression. Plant Physiology (Bethesda) , v. 152, p. 2120-2129, 2010.

• Balazadeh, Salma ; Siddiqui, Hamad ; Allu, Annapurna Devi ; Matallana-Ramirez, Lilian Paola ; CALDANA, C ; Mehrnia, Mohammad ; Zanor, Maria-Inés ; Köhler, Barbara ; Mueller-Roeber, Bernd . Gene regulatory network controlled by NAC transcription factor ANAC092/AtNAC2/ORE1 during salt-promoted senescence. Plant Journal (Print) , v. 62, p. 250-264, 2010.

• Massonnet, C. Vile, D. Fabre, J. Hannah, M. A. CALDANA, C Lisec, J. Beemster, G. T.S. Meyer, R. C. Messerli, G. Gronlund, J. T. Perkovic, J. Wigmore, E. May, S. Bevan, M. W. Meyer, C. Rubio-Diaz, S. Weigel, D. Micol, J. L. Buchanan-Wollaston, V. Fiorani, F. Walsh, S. Rinn, B. Gruissem, W. Hilson, P. Hennig, L. , et al. Willmitzer, L. Granier, C. ; Probing the reproducibility of leaf growth and molecular phenotypes: a comparison of three Arabidopsis accessions cultivated in ten laboratories. Plant Physiology (Bethesda) , v. 152, p. 2142-2157, 2010.

• Espinoza, Carmen ; Degenkolbe, Thomas ; CALDANA, C ; Zuther, Ellen ; Leisse, Andrea ; Willmitzer, Lothar ; Hincha, Dirk K. ; Hannah, Matthew A. . Interaction with Diurnal and Circadian Regulation Results in Dynamic Metabolic and Transcriptional Changes during Cold Acclimation in Arabidopsis. Plos One , v. 5, p. e14101, 2010.

• Cuadros-Inostroza, Alvaro ; CALDANA, C ; Redestig, Henning ; Kusano, Miyako ; Lisec, Jan ; Pena-Cortes, Hugo ; Willmitzer, Lothar ; Hannah, Matthew A . TargetSearch - a Bioconductor package for the efficient pre-processing of GC-MS metabolite profiling data. BMC Bioinformatics , v. 10, p. 428, 2009.

• Robles, P. ; Fleury, D. ; Candela, H. ; Cnops, G. ; Alonso-Peral, M. M. ; Anami, S. ; Falcone, A. ; CALDANA, C ; Willmitzer, L. ; Ponce, M. R. ; Van Lijsebettens, M. ; Micol, J. L. . The RON1/FRY1/SAL1 gene is required for leaf morphogenesis and venation patterning in Arabidopsis. Plant Physiology (Bethesda) , v. 152, p. 1357-1372, 2009.

• Gliwicka, M ; Balazadeh, Salma ; CALDANA, C ; Mueller-Roeber B ; Gaj, MD . The use of multi-qPCR platform and tan1 mutant in identification of TF genes involved in somatic embryogenesis in Arabidopsis. Acta Biologica Cracoviensia. Series Botanica , v. 51, p. 17-17, 2009.

• Willmitzer, L. ; Degenkolbe, T. ; CALDANA, C ; Hannah, M. . Systems response to environmental conditions as studied by metabolome analysis. NEW BIOTECHNOL , v. 25, p. S317-S317, 2009.

• CALDANA, C ; Scheible WR ; Mueller-Roeber B ; Ruzicic S . A quantitative RT-PCR platform for high-throughput expression profiling of 2500 rice transcription factors. Plant Methods , v. 3, p. 7, 2007.

• Thieme F ; Koebnik R ; Bekel T ; Berger C ; Boch J ; Büttner D ; CALDANA, C ; Gaigalat L . Insights into Genome Plasticity and Pathogenicity of the Plant Pathogenic Bacterium Xanthomonas campestris pv. vesicatoria Revealed by the Complete Genome Sequence. Journal of Bacteriology (Print) , v. 187, p. 7254-7266, 2005.

• SOUZA, A. A. ; TAKITA, M. A. ; COLETA FILHO, H. D. ; CALDANA, C ; YANAI, G. M. ; MUTO, N. H. ; OLIVEIRA, R. C. ; NUNES, L. R. ; MACHADO, M. A. . Gene expression profile of the plant pathogen Xylella fastidiosa during biofilm formation in vitro. FEMS Microbiology Letters , v. 237, p. 341-353, 2004.

• SOUZA, A. A. ; TAKITA, M. A. ; COLETA FILHO, H. D. ; CALDANA, C ; GOLDMAN, G. ; YANAI, G. M. ; MUTO, N. H. ; OLIVEIRA, R. C. ; NUNES, L. R. ; MACHADO, M. A. . Analysis of gene expression in two growth states of Xylella fastidiosa and its relationship with pathogenicity. Molecular Plant-Microbe Interactions , v. 16, p. 867-875, 2003.

• DE SOUZA, ALESSANDRA A. ; TAKITA, MARCO A. ; COLETTA-FILHO, HELVÉCIO D. ; CALDANA, C ; Goldman, Gustavo H. ; YANAI, GIANE M. ; MUTO, NAIR H. ; DE OLIVEIRA, REGINA C. ; NUNES, L. R. ; MACHADO, MARCOS A. . Analysis of Gene Expression in Two Growth States of Xylella fastidiosa and Its Relationship with Pathogenicity. Molecular Plant-Microbe Interactions , v. 16, p. 867-875, 2003.

• RICCI-SILVA, M. E. ; Vaz, BG ; VASCONCELOS, G. A. ; ROMAO, W. ; ARICETTI, J. A. ; CALDANA, C ; ABDELNUR, PATRICIA V . Mass Spectrometry for Metabolomics and Biomass Composition Analyses. Analytical Techniques and Methods for Biomass. 1ed.Basel: Springer International Publishing, 2016, v. , p. 115-141.

• Caldana, Camila ; VINCENTZ, M. G. A. . Proteína TOR pode ser a chave para controlar o crescimento de plantas. Revista FAPESP, Sao Paulo, 21 jul. 2016.

• Mueller-Roeber, Bernd ; Riaño-Pachón, Diego Mauricio ; Ruzicic S ; Skirycz A ; CALDANA, C. ; Witt I . Pflanzichen Regulatorproteine. Bioforum, p. 32.

• SOUZA, A. A. ; TAKITA, M. A. ; CALDANA, C ; YANAI, G. M. ; MUTO, N. H. ; OLIVEIRA, R. C. ; COLETA FILHO, H. D. ; NUNES, L. R. ; MACHADO, M. A. . Gene expression profile of X. fastidiosa cells growing attached to abiotic surfaces. In: I Simpósio Genoma Funcional da Xylella fastidiosa, 2001, Serra Negra. I Simpósio Genoma Funcional da Xylella fastidiosa. Sao Paulo: Fapesp, 2001. v. 1. p. 98.

• CALDANA, C ; SOUZA, A. A. ; TAKITA, M. A. ; COLETA FILHO, H. D. ; MACHADO, M. A. . Enrichment of total mRNA of Xylella fastidiosa for studies of gene expression. In: I Simpósio Genoma Funcional da Xylella fastidiosa, 2001, Serra Negra. I Simpósio Genoma Funcional da Xylella fastidiosa. Sao Paulo: Fapesp, 2001. v. 1. p. 96.

• ARAUJO, E. F. ; MONTE-BELLO, C. C. M. ; MARTINS, M. C. M. ; ABREU, L. G. F. ; SILVA, V. C. H. ; CALDANA, C. . The influence of the Target of Rapamycin (TOR) on starch metabolism in Arabidopsis thaliana. In: 26th International Conference on Arabidopsis Research (ICAR), 2015, Paris. 26th International Conference on Arabidopsis Research, 2015.

• MONTE-BELLO, C. C. M. ; ARICETTI, JULIANA A. ; ARAUJO, E. F. ; MARTINS, M. C. M. ; CALDANA, C . Cross-talk between the target of rapamycin (TOR) pathway and energetic metabolism in Arabidopsis thaliana. In: 11th International Congress of Plant Molecular Biology, 2015, Iguassu Falls. 11th International Congress of Plant Molecular Biology, 2015.

• CHEAVEGATTI GIANOTTO, A. C. ; SANTOS, F. R. ; ARICETTI, JULIANA A. ; Wolf, LD ; PINTO, L. R. ; Willmitzer, L. ; do Nascimento, F ; ABREU, L. G. F. ; SOUZA, A. P. ; GARCIA, A. A. F. ; CALDANA, C. . Metabolome profiles of stalk, mature leaf, seedling leaf and seedling root tissues of twenty sugarcane genotypes. In: 11th International Congress of Plant Molecular Biology, 2015, Iguassu Falls. 11th International Congress of Plant Molecular Biology, 2015.

• ARAUJO, E. F. ; ABREU, L. G. F. ; MONTE-BELLO, C. C. M. ; Martins, MCM ; CHEAVEGATTI GIANOTTO, A. C. ; SILVA, V. C. H. ; Cota, VM ; CALDANA, C. . Inhibition of the Target of Rapamycin complex impacts starch metabolism in Arabidopsis thaliana. In: 11th International Congress of Plant Molecular Biology, 2015, Iguassu Falls. 11th International Congress of Plant Molecular Biology, 2015.

• SILVA, V. C. H. ; ABREU, L. G. F. ; do Nascimento, F ; SOBREIRA, T. J. P. ; MARTINS, M. C. M. ; Caldana, Camila . Structural and Functional Characterization of FKB12 from Setaria spp. reveals its involvement in the 'Target Of Rapamycin' (TOR) pathway in C4 plants. In: 11th International Congress of Plant Molecular Biology, 2015, Iguassu Falls. 11th International Congress of Plant Molecular Biology, 2015.

• Li, Y ; CALDANA, C ; Giavalisco, P. ; Leisse A ; Willmitzer, L. . Raptor1, a binding protein of TOR (Target of Rapamycin), regulates energy metabolism in Arabidopsis thaliana. In: 2nd International Conference on Plant Metabolism, 2011, Qingdao. 2nd International Conference on Plant Metabolism, 2011.

• HUBBERTEN, H. ; CALDANA, C ; Klie S ; Willmitzer, L. ; Hoefgen, R. . Towards understanding the role of OAS in sulfur starvation response. In: 21st International Conference on Arabidopsis research, 2010, Yokahoma. ICAR2010, 2010. p. 87-87.

• Li, Y ; CALDANA, C ; Giavalisco, P. ; Leisse A ; Willmitzer, L. . Systems biology approach to analyze the function of Raptor1 in Arabidopsis. In: XVIII Congress of the Federation of European Societies of Plant Biology (FESPB), 2010, Valencia. XVIII Congress of the Federation of European Societies of Plant Biology (FESPB),, 2010.

• Mueller-Roeber B ; RIANO-PACHON DM ; Arvidsson S ; Kwasniewski M ; ESPINOSA, R. ; ALLU, A. D. ; Ruzicic S ; Soltani M ; SCHMIDT, R. ; CALDANA, C ; BALAZADEH, S. . Large-scale qRT-PCR transcriptome analysis of transcription factors in plants and algae. In: DNA Proteome, 2009, Barcelona. DNA Proteome, 2009.

• Gliwicka, M ; BALAZADEH, S. ; CALDANA, C ; Mueller-Roeber B ; Gaj, MD . The use of multi-qPCR platform and tan1 mutant in identification of TF genes involved in somatic embryogenesis in Arabidopsis. In: XII Konferencja Kultur in vitro i Biotechnologii Roślin, 2009, Poznań. XII Konferencja Kultur in vitro i Biotechnologii Roślin: Integracji biotechnologii, biologii molekularnej i praktyki rolniczej w kulturach in vitro..

• Peña-Cortés, H. ; Cuadros-Inostroza, A ; Ramírez, I. ; González, E. ; Ruíz, S. ; CALDANA, C ; Giavalisco, P. ; Willmitzer, L. . Integrated analysis of transcriptome and metabolome to understand grapevine development and its relation to wine attributes. In: What's up in viticulture; COST 858 Viticulture Final Meeting, 2009, Bordeaux. COST 858 Viniculture, final meeting. What's up in viticulture. Bordeaux, 2009. p. 31.

• CALDANA, C ; Cuadros-Inostroza, A ; Ruíz, S. ; González, E. ; Willmitzer, L. ; Peña-Cortés, H. . A novel qRT-PCR platform for profiling over 800 genes of grapevine. In: Plant Biology 2008, 2008, Merida. Joint Annual Meeting American Society of Plant Biologists and Sociedad Mexicana de Bioquímica. Rama: Bioquímica y Biología Molecular de Plantas, 2008.

• Cuadros-Inostroza, A ; CALDANA, C ; Giavalisco, P. ; Willmitzer, L. ; Peña-Cortés, H. ; Dorta, F. . Characterisation of the grapevine development and ripening by integrated analysis of transcriptome and metabolome. In: 8th International Symposium on Grapevine Physiology and Biotechnology, 2008, Adelaide. 8th International Symposium on Grapevine Physiology and Biotechnology, 2008. p. 49.

• Willmitzer, L. ; CALDANA, C ; Fernie, A.R. ; Giavalisco, P. ; Hannah, M. ; Redestig, H. ; Steinhauser, D. . Integrative Analysis of Transcriptome and Metabolome Data. In: German Conference on Bioinformatics, 2007, Potsdam. Proceedings of the German Conference on Bioinformatics, 2007. v. 115. p. 198.

• Soltani M ; Ruzicic S ; CALDANA, C ; RIANO-PACHON DM ; Mueller-Roeber B . Transcription factor networks in the initial phase of drought stress in rice (Oryza sativa L.). In: 5th International symposium on rice functional genomics, 2007. 5th International symposium on rice functional genomics, 2007.

• Peña-Cortés, H. ; Cuadros, A. ; Dorta, F. ; Ramírez, I. ; Ruíz, S. ; González, E. ; POBLETE, F. ; CALDANA, C ; Giavalisco, P. ; Willmitzer, L. . Co-relation of transcriptional profiles and metabolic profiles to characterize the development and ripening of grapevine berries. In: II Reunion de Biologia Vegetal, 2007, Santiago. II Reunion de Biologia Vegetal, 2007. p. 9.

• Soltani M ; CALDANA, C ; RIANO-PACHON DM ; Mueller-Roeber B ; Ruzicic S . Transcription factors network in the initial phase of drought stress in rice (Oryza sativa L.). In: 4th International Rice Functional Genomics Symposium, 2006, Montpellier. 4th International Rice Functional Genomics Symposium, 2006. p. 125.

• Ruzicic S ; CALDANA, C ; Soltani M ; RIANO-PACHON DM ; Mueller-Roeber B . Transcription factors networks in the initial phase of abiotic stress in rice. In: 11th IAPTC & B Congress Plant Tissue Culture & Biotechnology, 2006, Pequim. 11th IAPTC & B Congress Plant Tissue Culture & Biotechnology, 2006. p. 1223.

• Ruzicic S ; CALDANA, C ; Soltani M ; RIANO-PACHON DM ; Mueller-Roeber B . Tools for expression profiling and regulatory mapping of transcription factors. In: Molecular Interactions Workshop, 2006, Berlim. Molecular Interactions Workshop, 2006.

• CALDANA, C ; Ruzicic S ; RIANO-PACHON DM ; Mueller-Roeber B . Genome wide identification of transcription factors in initial phase of salt stress in rice.. In: 16th International Conference on Arabidopsis Research, 2005, Madison. 16th International Conference on Arabidopsis Research, 2005. p. 475.

• Ruzicic S ; CALDANA, C ; Soltani M ; RIANO-PACHON DM ; Mueller-Roeber B . Comparative expression profiling of different rice varieties during initial phase of abiotic stress. In: 5TH International Rice Genetics Symposium, 2005, Manilla-Filipinas. 5TH International Rice Genetics Symposium, 2005. p. 329.

• Mueller-Roeber B ; CALDANA, C ; RIANO-PACHON DM ; Soltani M ; Ruzicic S . Novel approaches to study transcription regulation. In: Molecular Interactions Workshop, 2005, Berlim. Molecular Interactions Workshop, 2005.

• CALDANA, C ; Ruzicic S ; RIANO-PACHON DM ; Mueller-Roeber B . Genome-wide identification and characterization of transcription factors involved in the initial phase of salt stress in rice. In: XVI Berliner Botanischen Graduierten- Kolloquium Havel- Spree- Kolloquium?, 2005, Potsdam. XVI Berliner Botanischen Graduierten- Kolloquium Havel- Spree- Kolloquium?, 2005.

• CALDANA, C ; SOUZA, A. A. ; COLETA FILHO, H. D. ; TAKITA, M. A. ; OBLESSUC, P. ; SMOLKA, M. B. ; NOVELO, J. C. ; MACHADO, M. A. . Identificação de proteínas diferencialmente expressas em Xylella fastidiosa em condições de adesão. In: XXXV Congresso Brasileiro de Fitopatologia, 2002, Recife. Fitopatologia Brasileira. Brasília: Sociedade Brasileira de Fitopatologia, 2002. v. 27. p. 217.

• SOUZA, A. A. ; TAKITA, M. A. ; COLETA FILHO, H. D. ; CALDANA, C ; OBLESSUC, P. ; SMOLKA, M. B. ; NOVELO, J. C. ; MACHADO, M. A. . Análise proteômica de Xylella fastidiosa sob condições de adesão em superfície abiótica. In: XXXV Congresso Brasileiro de Fitopatologia, 2002, Recife. Fitopatologia Brasileira. Brasília: Sociedade Brasileira de Fitopatologia, 2002. v. 27. p. 70.

• CALDANA, C ; SOUZA, A. A. ; COLETA FILHO, H. D. ; TAKITA, M. A. ; VILDOSO, C. I. ; MACHADO, M. A. . Curvas de crescimento de Xylella fastidiosa em condições de adesão. In: XXXV Congresso Brasileiro de Fitopatologia, 2002, Recife. Fitopatologia Brasileira. Brasília: Sociedade Brasileira de Fitopatologia, 2002. v. 27. p. 57.

• SOUZA, A. A. ; TAKITA, M. A. ; CALDANA, C ; YANAI, G. M. ; MUTO, N. H. ; OLIVEIRA, R. C. ; COLETA FILHO, H. D. ; Osiro D ; COLNAGO LA ; NUNES, L. R. ; MACHADO, M. A. . Expressão de genes e compostos extracelulares de Xylella fastidiosa crescidas em condições de biofilme.. In: 48º Congresso Nacional de Genética, 2002, Aguas de Lindóia. 48º Congresso Nacional de Genética. Ribeirão Preto - SP: Sociedade Brasileira de Genética, 2002. v. 1. p. GN030.

• CALDANA, C ; SOUZA, A. A. ; KURAMAE-IZIOKA, E. ; YANAI, G. M. ; COLETA FILHO, H. D. ; NUNES, L. R. ; TAKITA, M. A. ; MACHADO, M. A. ; MUTO, N. H. ; OLIVEIRA, R. C. . Differential expression profile of X. fastidiosa cells grown under aggregating and non-aggregating conditions revealed by microarray. In: XV Conference of the International Organization of Citrus Virologists, 2001, Paphos. XV Conference of the International Organization of Citrus Virologists. Paphos, Cyprus.Programme&Abstracts, 2001. p. 166.

• CALDANA, C ; COLETA FILHO, H. D. ; MACHADO, M. A. . Effect of copper, zinc, and boron on the growth of Xylella fastidiosa in vitro. In: Congresso Brasileiro de Fitopatologia, 2001. Brazilian Phytopatology, 2001. v. 26. p. 297.

• CALDANA, C ; SOUZA, A. A. ; KURAMAE-IZIOKA, E. ; COLETA FILHO, H. D. ; NUNES, L. R. ; TAKITA, M. A. ; MACHADO, M. A. ; MUTO, N. H. . Evaluation of differentially expressed genes of Xylella fastidiosa through microarray analysis. In: Congresso Brasileiro de Fitopatologia, 2001. Brazilian Phytopatology, 2001. v. 26. p. 296-297.

• CALDANA, C ; SOUZA, A. A. ; COLETA FILHO, H. D. ; YANAI, G. M. ; NUNES, L. R. ; TAKITA, M. A. ; MACHADO, M. A. ; MUTO, N. H. ; OLIVEIRA, R. C. . Gene expression profile of Xylella fastidiosa cells growing attached to abiotic surfaces. In: . I Simposium of Funcional Genomics of Xylella fastidiosa, 2001, Serra Negra. . I Simposium of Funcional Genomics of Xylella fastidiosa, 2001. p. 97.

• CALDANA, C ; ROCHA, G. T. ; CURI, V. S. ; CESAR, P. R. . Determinação Cromossômica do Sexo da espécie Pipile jacutinga(GALLIFORMES, AVES) Ameaçadas de Extinção. In: Reunião Anual da SBPC, 1998, Natal, 1998.

• CALDANA, C ; CURI, V. S. ; ROCHA, G. T. ; CESAR, P. R. . Análise Cromossômica e Determinação Cromossômica do Sexo de Exemplares das Espécies Pipile jacutinga e Penelope superciliares (GALLIFORMES, AVES) Mantidas em Programa de Reproduçãoe Reintrodução na Ntureza. In: Congresso Brasileiro de Genética, 1998, Águas de Lindóia, 1998.

• CALDANA, C ; CURI, V. S. ; CESAR, P. R. ; ROCHA, G. T. . Análise cromossômica e determinação do sexo de exemplares das espécies Pipile jacutinga e Penelope superciliares (Galliformes, Aves) mantidas em programas de reprodução e reintrodução na natureza. In: II Semana da Bio - IV Mini-Congresso de estudantes da área biológica, 1998, Botucatu. II Semana da Bio - IV Mini-Congresso de estudantes da área biológica, 1998.

• CALDANA, C ; CURI, V. S. ; ROCHA, G. T. . Citogenética e relações evolutivas na família Tinamidae (Tinamiformes, Aves). In: X Congresso de Iniciação Científica, 1998, Araraquara. X Congresso de Iniciação Científica, 1998.

• SANTOS, R. M. L. ; CALDANA, C ; ROCHA, G. T. ; NISHIDA, S. M. . Cararterização Cromossômica de uma População em cativeiro da espécie Hydrochoerus hydrochaeris(CAPIVARA). In: Congresso Nacional de Genética, 1997, Goiânia. Revista Brasileira de Genética. Ribeirão Preto: Sociedade Brasileira de Genética, 1997. v. 20. p. 75-75.

• CALDANA, C ; SANTOS, R. M. L. ; ROCHA, G. T. ; NISHIDA, S. M. . Caracterização cromossômica de uma população em cativeiro da espécie Hydrochoerus hydrochaeris (capivara). In: I Semana da Bio - III Mini Congresso dos Estudantes da Área Biológica, 1997, Botucatu. III Mini Congresso dos Estudantes da Área Biológica, 1997.

• CALDANA, C ; SANTOS, R. M. L. ; ROCHA, G. T. ; NISHIDA, S. M. . Caracterização cromossômica de uma população em cativeiro da espécie Hydrochoerus hydrochaeris (capivara). In: IX Congresso de Iniciação Científica, 1997, Jaboticabal. IX Congresso de Iniciação Científica, 1997.

• MANDELLI, F. ; COUGER, M. B. ; PAIXÃO, D. A. A. ; MACHADO, C. B. ; CARNIELLI, C. M. ; ARICETTI, J. A. ; POLIKARPOV, I. ; PRADE, R. ; CALDANA, C. ; PAES LEME, A. F. ; MERCADANTE, A. Z. ; RIAÑO-PACHÓN, D. M. ; SQUINA, FABIO MARCIO . Thermal adaptation strategies of the extremophile bacterium Thermus filiformis based on multi-omics analysis. EXTREMOPHILES , 2017.

• SCHAKER, PATRICIA D. C. ; PETERS, LEILA P. ; CATALDI, THAIS R. ; LABATE, CARLOS A. ; Caldana, Camila ; MONTEIRO-VITORELLO, CLAUDIA B. . Metabolome Dynamics of Smutted Sugarcane Reveals Mechanisms Involved in Disease Progression and Whip Emission. Frontiers in Plant Science , 2017.

• JÜPPNER, JESSICA ; MUBEEN, UMARAH ; Leisse, Andrea ; Caldana, Camila ; BRUST, HENRIKE ; STEUP, MARTIN ; HERRMANN, MARION ; Steinhauser, Dirk ; GIAVALISCO, PATRICK . Dynamics of lipids and metabolites during the cell cycle of. PLANT JOURNAL , 2017.

• SEKI, MOTOHIDE ; OHARA, TAKAYUKI ; HEARN, TIMOTHY J. ; FRANK, ALEXANDER ; DA SILVA, VIVIANE C. H. ; Caldana, Camila ; WEBB, ALEX A. R. ; SATAKE, AKIKO . Adjustment of the Arabidopsis circadian oscillator by sugar signalling dictates the regulation of starch metabolism. Scientific Reports , 2017.

• DE VRIES, RONALD P. RILEY, ROBERT WIEBENGA, AD AGUILAR-OSORIO, GUILLERMO AMILLIS, SOTIRIS UCHIMA, CRISTIANE AKEMI ANDERLUH, GREGOR ASADOLLAHI, MOJTABA ASKIN, MARION BARRY, KERRIE BATTAGLIA, EVY BAYRAM, ÖZGÜR BENOCCI, TIZIANO BRAUS-STROMEYER, SUSANNA A. Caldana, Camila CÁNOVAS, DAVID CERQUEIRA, GUSTAVO C. CHEN, FUSHENG CHEN, WANPING CHOI, CINDY CLUM, ALICIA DOS SANTOS, RENATO AUGUSTO CORRÊA DAMÁSIO, ANDRÉ RICARDO DE LIMA DIALLINAS, GEORGE EMRI, TAMÁS , et al. FEKETE, ERZSÉBET FLIPPHI, MICHEL FREYBERG, SUSANNE GALLO, ANTONIA GOURNAS, CHRISTOS HABGOOD, ROB HAINAUT, MATTHIEU HARISPE, MARÍA LAURA HENRISSAT, BERNARD HILDÉN, KRISTIINA S. HOPE, RYAN HOSSAIN, ABEER KARABIKA, EUGENIA KARAFFA, LEVENTE KARÁNYI, ZSOLT KRA?EVEC, NADA KUO, ALAN KUSCH, HARALD LABUTTI, KURT LAGENDIJK, ELLEN L. LAPIDUS, ALLA LEVASSEUR, ANTHONY LINDQUIST, ERIKA LIPZEN, ANNA LOGRIECO, ANTONIO F. MACCABE, ANDREW MÄKELÄ, MIIA R. MALAVAZI, IRAN MELIN, PETTER MEYER, VERA MIELNICHUK, NATALIA MISKEI, MÁRTON MOLNÁR, ÁKOS P. MULÉ, GIUSEPPINA NGAN, CHEW YEE OREJAS, MARGARITA OROSZ, ERZSÉBET OUEDRAOGO, JEAN PAUL OVERKAMP, KARIN M. PARK, HEE-SOO PERRONE, GIANCARLO PIUMI, FRANCOIS PUNT, PETER J. RAM, ARTHUR F. J. RAMÓN, ANA RAUSCHER, STEFAN RECORD, ERIC Riaño-Pachón, Diego Mauricio ROBERT, VINCENT RÖHRIG, JULIAN RULLER, ROBERTO SALAMOV, ASAF SALIH, NADHIRA S. SAMSON, ROB A. SÁNDOR, ERZSÉBET SANGUINETTI, MANUEL SCHÜTZE, TABEA SEPč SHELEST, EKATERINA SHERLOCK, GAVIN SOPHIANOPOULOU, VICKY SQUINA, FABIO M. SUN, HUI SUSCA, ANTONIA TODD, RICHARD B. TSANG, ADRIAN UNKLES, SHIELA E. VAN DE WIELE, NATHALIE VAN ROSSEN-UFFINK, DIANA OLIVEIRA, JULIANA VELASCO DE CASTRO VESTH, TAMMI C. VISSER, JAAP YU, JAE-HYUK ZHOU, MIAOMIAO ANDERSEN, MIKAEL R. ARCHER, DAVID B. BAKER, SCOTT E. BENOIT, ISABELLE BRAKHAGE, AXEL A. BRAUS, GERHARD H. FISCHER, REINHARD FRISVAD, JENS C. GOLDMAN, GUSTAVO H. HOUBRAKEN, JOS OAKLEY, BERL PÓCSI, ISTVÁN SCAZZOCCHIO, CLAUDIO SEIBOTH, BERNHARD VANKUYK, PATRICIA A. WORTMAN, JENNIFER DYER, PAUL S. GRIGORIEV, IGOR V. ; Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus. GENOME BIOLOGY , 2017.

• CALDANA, C. . Deciphering Plant Metabolic Regulation Puzzle: The Role of TOR Kinase Signalling. 2016. (Apresentação de Trabalho/Conferência ou palestra).

• CALDANA, C. . Metabolômica: uma ferramenta poderosa para elucidar a regulação do crescimento vegetal. 2016. (Apresentação de Trabalho/Conferência ou palestra).

• CALDANA, C. . Metabolomics as a tool for elucidating plant growth regulation. 2016. (Apresentação de Trabalho/Simpósio).

• CALDANA, C . Deciphering Plant Metabolic Regulation Puzzle: examples of metabolites affecting biomass production. 2016. (Apresentação de Trabalho/Simpósio).

• CALDANA, C. . Cross-talk between the Target of Rapamycin (TOR) pathway and energetic metabolism in plants.. 2015. (Apresentação de Trabalho/Conferência ou palestra).

• CALDANA, C . Metabolomics: a powerful tool for elucidating plant growth regulation. 2015. (Apresentação de Trabalho/Conferência ou palestra).

• CALDANA, C. . Regulation of plant growth and metabolism by the Target Of Rapamycin (TOR) Signaling Networks. 2015. (Apresentação de Trabalho/Outra).

• CALDANA, C. . Plant Biology at CTBE. 2015. (Apresentação de Trabalho/Outra).

• CALDANA, C . Metabolômica: princípios e aplicações em fisiologia molecular de plantas. 2014. (Apresentação de Trabalho/Conferência ou palestra).

• CALDANA, C . A systems-approach to understand the regulation of plant growth and biomass production in bioenergy crops. 2014. (Apresentação de Trabalho/Conferência ou palestra).

• CALDANA, C . A systems-approach to understand the regulation of plant growth and biomass production in bioenergy crops. 2014. (Apresentação de Trabalho/Seminário).

• CALDANA, C. . A systems-approach to understand the regulation of plant growth and biomass production in bioenergy crops. 2014. (Apresentação de Trabalho/Simpósio).

• CALDANA, C. . Regulation of plant growth by the target of rapamycin (TOR) pathway. 2014. (Apresentação de Trabalho/Congresso).

• CALDANA, C. . Mecanismos geneticos de defesa vegetal a estresse abiotico. 2014. (Apresentação de Trabalho/Conferência ou palestra).

• CALDANA, C. . Cross-talk between the Target of Rapamycin (TOR) pathway and energetic metabolism in plants. 2014. (Apresentação de Trabalho/Seminário).

• CALDANA, C . Metabolômica: Princípios, limitações e aplicações em alterações metabólicas tumorais. 2012. (Apresentação de Trabalho/Seminário).

• CALDANA, C ; Perspectives of Bioethanol Research in Brazil. 2012. (Apresentação de Trabalho/Conferência ou palestra).

• CALDANA, C . Metabolômica: Princípios, limitações e aplicações em fisiologia de plantas. 2012. (Apresentação de Trabalho/Seminário).

• CALDANA, C ; TOR: regulatory switch in yeast and plants?. 2011. (Apresentação de Trabalho/Seminário).

• CALDANA, C ; TOR: llave regulatoria en levaduras y organismos fotosintéticos?. 2010. (Apresentação de Trabalho/Conferência ou palestra).

• CALDANA, C ; TOR: regulatory swicht in yeast and plants?. 2010. (Apresentação de Trabalho/Conferência ou palestra).

• CALDANA, C ; Degenkolbe T ; Cuadros-Inostroza, Alvaro ; Leisse A ; Willmitzer, L. ; Hannah, Matthew A . Metabolite and transcript interactions in response to temperature and light in Arabidopsis thaliana. 2009. (Apresentação de Trabalho/Conferência ou palestra).

• CALDANA, C ; Degenkolbe T ; Cuadros-Inostroza, Alvaro ; Klie S ; Leisse A ; Steinhauser, D. ; Willmitzer, L. ; Hannah, Matthew A . System-wide metabolic reprogramming in response to interacting environmental gradients. 2009. (Apresentação de Trabalho/Conferência ou palestra).

• CALDANA, C . Metabolite and transcript interactions in response to the environment. 2009. (Apresentação de Trabalho/Conferência ou palestra).

• CALDANA, C ; Cuadros-Inostroza, A ; Leisse A ; Hannah, M. A. ; Degenkolbe, T. ; Willmitzer, L. . Metabolite and transcript interactions in response to light and temperature in Arabidopsis thaliana.. 2009. (Apresentação de Trabalho/Simpósio).

• CALDANA, C ; Willmitzer, L. . Genes and Small Molecules. 2008. (Apresentação de Trabalho/Seminário).

• CALDANA, C ; Ruzicic S ; RIANO-PACHON DM ; Mueller-Roeber B . Genome-wide Analysis of Rice Transcription Factors Involved in the Initial Phase of Salt Stress. 2008. (Apresentação de Trabalho/Seminário).

• CALDANA, C ; Cuadros-Inostroza, A ; Ruíz, S. ; González, E. ; Willmitzer, L. ; Peña-Cortés, H. . A novel qRT-PCR platform for profiling over 800 genes of grapevine.. 2008. (Apresentação de Trabalho/Conferência ou palestra).

• CALDANA, C ; Mueller-Roeber B ; RIANO-PACHON DM ; Ruzicic S . Transcription factors networks in the initial phase of salt stress in rice.. 2006. (Apresentação de Trabalho/Conferência ou palestra).

• Ruzicic S ; CALDANA, C ; Soltani M ; Riaño-Pachón, Diego Mauricio ; REPSILBER, D. ; Mueller-Roeber B . Tools for expression profiling and regulatory mapping of transcription factors. 2006. (Apresentação de Trabalho/Outra).

• CALDANA, C ; Ruzicic S ; RIANO-PACHON DM ; Mueller-Roeber B . Genome wide identification and characterization of transcription factors involved in the initial phase of salt stress in rice. 2005. (Apresentação de Trabalho/Conferência ou palestra).

Outras produções

Projetos de pesquisa

• 2016 - Atual

  Can we control how plants produce their biomass?, Descrição: Plants ability to grow tall and slender depends on how well they produce secondary cell wall structures. These structures are largely made of sugar-based polymers, and also constitute the bulk of a plant?s biomass and are thus also essential for many industrial applications, including fuel, construction and biomaterials. We will investigate how a central carbon-coordinator, the TOR complex, regulates the carbon partitioning into secondary walls in Arabidopsis and the important grass plant Setaria. The results will lay a foundation to an important research collaboration that include student exchange and that will strengthen the alignments between FAPESP and UoM.. , Situação: Em andamento; Natureza: Pesquisa. , Alunos envolvidos: Doutorado: (5) . , Integrantes: Camila Caldana - Coordenador / Valeria Mafra Cota - Integrante / Igor Cesarino - Integrante / Staffan Persson - Integrante / Maria Juliana Calderan Rodrigues - Integrante., Financiador(es): Fundação de Amparo à Pesquisa do Estado de São Paulo - Cooperação.

• 2014 - Atual

  A systems-approach to understand the regulation of plant growth and biomass production in bioenergy crops, Descrição: This project aims to elucidate the processes underlying plant growth and biomass production, with relevance to bioenergy breeding programs. By applying functional genomics, physiological and metabolic characterization, the partner group will work on: (i) identification of genetic components of the major growth regulator TOR; and (ii) use of sugarcane natural variation to explore factors controlling metabolism and plant biomass. The generated knowledge will contribute to improve plant performance by exploring and ameliorating regulatory networks that control metabolism and development.. , Situação: Em andamento; Natureza: Pesquisa. , Alunos envolvidos: Graduação: (1) / Especialização: (2) / Mestrado acadêmico: (1) / Doutorado: (3) . , Integrantes: Camila Caldana - Coordenador / Willmitzer, Lothar - Integrante / Marina Câmara Mattos Martins - Integrante / Juliana Aparecida Aricetti - Integrante / Viviane Henzein da Silva - Integrante / Valeria Mafra Cota - Integrante / Carolina Cassano Monte Bello - Integrante / Luis Guilherme de Abreu Furlan - Integrante / Lucia Daniela Wolf - Integrante / Elias Feitosa - Integrante / FERREIRA, DANILO ALVES - Integrante / Ana Beatriz Verdugo - Integrante / Maria Juliana Calderan Rodrigues - Integrante., Financiador(es): Max Planck Institute of Molecular Plant Physiology - Outra.

• 2013 - Atual

  Metabolic Markers as selection tool for sugarcane breeding, Descrição: The worldwide rising demand for fuels can be met with an increase in the bioethanol production capability. A sustainable option for achieving such a goal, while caring for an optimization of the land occupied, encloses the enhancement of sugarcane yield. Classical sugarcane breeding programs, which are characterized by performing a large number of crosses among suitable parental genotypes followed by the selection and cloning of contrasting individuals among the progeny, are thus costly and very time-consuming. In the last decade, the development of genetic markers such as single nucleotide polymorphism (SNP) has revolutionized plant breeding by allowing the selection of promising genotypes at their early developmental stages. However, the use of genetic mapping alone does not permit to elucidate the complexity of phenotypic traits. In addition, the intrinsic complexity of the sugarcane genetic architecture, as well as the paucity of its genomic sequence precludes the efficiency in releasing new commercial cultivars. With the aim of further optimizing sugarcane breeding programs, the prime goal of this project is to explore the potential of metabolite profiles used as biomarkers to predict plant performance. Metabolomics, which represents the chemical composition in a cell, is a powerful tool in deciphering metabolism and bridging the phenotype?genotype. Metabolic profiling will be conducted through gas-chromatography coupled to mass spectrometry (GC-MS) analysis. This technique has been extensively developed by the research group of Prof. Lothar Willmitzer, participant of this proposal as a Visiting Researcher, at the Max Planck Institute of Molecular Plant Physiology (MPIMP) in Germany. Prof. Willmitzer?s group has identified the overlap of yield quantitative trait locus (QTLs) with a large number of metabolite accumulation QTL. In addition, he is one of the pioneers in using multivariate analysis of the metabolic content to predict complex traits such as plant bi. , Situação: Em andamento; Natureza: Pesquisa. , Integrantes: Camila Caldana - Coordenador / Lothar Willmitzer - Integrante / Marina Câmara Mattos Martins - Integrante / Anete Pereira de Souza - Integrante / Antonio Augusto Franco Garcia - Integrante / Luciana Rossini Pinto - Integrante / Juliana Aparecida Aricetti - Integrante / Adriana Cheavegatti Gianotto - Integrante., Financiador(es): Conselho Nacional de Desenvolvimento Científico e Tecnológico - Outra.

• 2013 - Atual

  Regulation of Plant Growth by Target of Rapamycin (TOR) pathway, Descrição: Rising demand for food and fuels makes crucial to develop breeding strategies for increasing crop yield/biomass. Plant biomass production is closely linked to growth and depends on a tight regulation of a complex signalling network that integrates external and internal. One of the key regulators of growth in all eukaryotes is the Target of Rapamycin kinase pathway (TOR). TOR integrates environmental cues such as energy status or nutrient availability into cell growth and proliferation. In the model plant Arabidopsis thaliana the levels of TOR expression are positively correlated with growth. However little is known about the mode of action of TOR controlling growth in photosynthetic organisms. Over the last years, the main goal of our group has been to understand the molecular mechanisms involved in growth and metabolism of plants modulated by TOR. Recently, experimental evidences revealed that the disruption of this essential protein leads to severe growth phenotypes, which are based on the essential reprogramming of the plant metabolism. The identification of plant TOR as a potent metabolic switch offers a novel route for biotechnological optimization of plant carbon partition for bioenergy production. However, there are still many gaps about how TOR controls those metabolic decisions and regulates growth, especially in C4 plant species used for biofuels production due to their capability to produce biomass at faster rates. Therefore, our aim is to use a systems-oriented approach to dissect TOR signalling network involved in plant growth and metabolism using both C3 and C4 model species (Arabidopsis and Setaria italica, respectively). Such approach is expected to reveal how plants adjust their metabolism ratios in order to simplify the conversion of plant biomass into biofuels. Moreover, the comparisons between these two photosynthetic systems will allow further comprehension of the growth regulatory network-mediated by TOR contributing to the efforts in bioengi. , Situação: Em andamento; Natureza: Pesquisa. , Alunos envolvidos: Especialização: (1) Doutorado: (2) . , Integrantes: Camila Caldana - Coordenador / Lothar Willmitzer - Integrante / Marina Câmara Mattos Martins - Integrante / Michel Georges Albert Vincentz - Integrante / Luís Guilherme Furlan de Abreu - Integrante / Sarita Rabelo - Integrante / Jayr Amorin Filho - Integrante / Diego Mauricio Riaño-Pachón - Integrante / SILVANA APARECIDA CRESTE DIAS DE SOUZA - Integrante / Carlos T Hotta - Integrante / Valeria Mafra Cota - Integrante / Carolina Cassano Monte Bello - Integrante / MEYER, CHRISTIAN - Integrante / Ana Beatriz Verdugo - Integrante / Maria Juliana Calderan Rodrigues - Integrante., Financiador(es): Fundação de Amparo à Pesquisa do Estado de São Paulo - Auxílio financeiro.

• 2011 - 2013

  A Systems approach to understand yeast alcoholic fermentation: characterizing the strains used in the Brazilian Industry., Descrição: The Brazilian bioethanol production system uses the yeast Saccharomyces cerevisae to directly convert the sucrose accumulated in sugarcane into ethanol. During a fermentation cycle, yeast cells are exposed to a range of stress factors, such as changes in pH, temperature, ethanol concentration, among others. As the fermentation processes occurs continuously (i.e., yeast inoculums are recycled and used throughout the entire sugarcane harvest season), the success of those cells to cope to such harsh environment is largely dependent on their robustness. Although the industry has been selecting yeast strains with high fermentation efficiency and prolonged resistance to the system, little is known about the molecular mechanisms underlying such robustness. Metabolomics, which represents the chemical composition in a cell, enables a global view of cellular functions since it directly reflects the physiological status of a cell. Several studies have demonstrated that metabolomics could be a powerful tool in deciphering metabolism and bridging the phenotype?genotype gap since it provides a better representation of the phenotype of an organism than any other methods. In the present work, we use a systems approach to generate an understanding of the biological processes underlying robust yeast strains metabolism. To this aim, we will perform a comprehensive profiling of polar metabolites of the primary metabolism of the three commonly used yeast strains (PE-2, CAT-1 and FT588L) and the wild-type SC288 strain using gas chromatography-time of flight mass spectrometry (GC-TOF MS). The genotypes will be compared in three crucial steps of one fermentation cycle: acid treatment, fed-batch and fermentation. , Situação: Concluído; Natureza: Pesquisa. , Integrantes: Camila Caldana - Coordenador / GH Goldman - Integrante / Lothar Willmitzer - Integrante / Mario Lucio Lopes - Integrante / Vyachslav Zagoriy - Integrante / Henrique V. Amorim - Integrante / Marina Câmara Mattos Martins - Integrante / Juliana Velasco de Castro Oliveira - Integrante.

• 2008 - 2011

  Functional Characterization of TOR (target of rapamycin) complex, Situação: Concluído; Natureza: Pesquisa. , Alunos envolvidos: Graduação: (1) / Doutorado: (3) . , Integrantes: Camila Caldana - Integrante / Lothar Willmitzer - Coordenador / Patrick Giavalisco - Integrante / Andrea Leisse - Integrante / Yan Li - Integrante / Jessica Jueppner - Integrante / Susan Irgang - Integrante / Lisa Bartolomeu - Integrante., Financiador(es): Max Planck Gesselschaft - Auxílio financeiro.

• 2007 - Atual

  Metabolite and transcript interactions in response to the environment, Descrição: Systems biology is an emergent field that links molecular biology and physiology by integrating different levels of information about a biological system. With the advent of the ?-omics? technologies it is now possible to characterize certain molecular phenotypes. This study is a part of a long-term work, whose main goal is to understand the dynamics of system-level response to temperature and light by identifying small molecules acting as signal and new signalling pathways. For this propose, the model plant Arabidopsis is being analyzed at transcriptional and metabolic level. By this strategy we expect to obtain inter-prediction of metabolite, transcript and environmental states.. , Situação: Em andamento; Natureza: Pesquisa. , Alunos envolvidos: Doutorado: (2) . , Integrantes: Camila Caldana - Coordenador / Lothar Willmitzer - Integrante / Matthew Hannah - Integrante / Dirk Steinhauser - Integrante / Thomas Degenkolbe - Integrante / Andrea Leisse - Integrante / Sebastian Klie - Integrante / Alvaro Cuadros-Inostroza - Integrante., Financiador(es): max Planck Gesselschaft - Auxílio financeiro.

• 2006 - 2011

  Characterization of the grapevine development and ripening by integrated analysis of transcriptome and metabolome, Descrição: Different physiological and biochemical processes are involved in the fruit setting, development and ripening of grapevine berries. Diverse efforts using varied Omics-technologies are being applied with the objective to characterize certain key biological processes (genes, proteins and metabolites) involved at the different fruit development and ripening stages of this fruit which could allow, in a near future, to improve its quality and consequently the quality of wine. This work is a part of study which has a main goal the characterization of biological processes involved in development and maturation of the wine grapevine fruits using transcriptomics and metabolomics. By using this resource we expect to reveal the developmental processes of wine grapevine berries.. , Situação: Concluído; Natureza: Pesquisa. , Alunos envolvidos: Doutorado: (1) . , Integrantes: Camila Caldana - Integrante / Lothar Willmitzer - Integrante / Patrick Giavalisco - Integrante / Hugo Peña-Cortés - Coordenador / Fernando Dorta - Integrante.

• 2004 - 2008

  Genome-wide Identification and Functional Characterization of Rice Transcription Factors Involved in the Initial Phase of Abiotic Stress, Descrição: The crucial role of transcriptional regulators (TF) in the regulation of stress responses has been proven in several cases. Nevertheless, cell-specific expression patterns and the low expression level of many transcriptional regulators often complicate the identification and functional analysis of these genes. Currently, the number of TFs with a proven role in salt/osmotic response is still limited. Using Rice Transcription Factor Database (http://ricetfdb.bio.uni-potsdam.de) information, we established a high-throughput real-time PCR technology platform for rice TF genes that allows us to perform genome-wide screenings for transcriptional regulators which change during developmental processes or under defined physiological conditions. This novel platform was used to screen for genes that respond to salt/osmotic stress in pre-selected salt-tolerant and sensitive rice indica cultivars. To understand the regulatory gene networks in stress response cascade, we decided to search for any enriched motifs upstream of the salt regulated genes in silico. For further functional characterization T-DNA for five of the salt-regulated TFs were selected and characterized. Analysis of physiological parameters in response to salt stress treatment revealed that three T-DNA insertion lines showed visible phenotypes (enhanced stress tolerance).. , Situação: Concluído; Natureza: Pesquisa. , Alunos envolvidos: Doutorado: (1) . , Integrantes: Camila Caldana - Integrante / Bernd Mueller-Roeber - Coordenador / Slobodan Ruzicic - Integrante / Diego Mauricio Riano-Pachón - Integrante / Masood Soltani - Integrante / Soledad Garcia - Integrante.

Prêmios